Publications#

In this research field, the order of names in the author list typically reflects the author contributions. The first author has made the most significant contribution to the paper, such as acquiring and analyzing the data, or to writing the manuscript. The corresponding or last author is the lead PI, who has supervised, financed, or been the main person responsible for the project.

Chronologically#

2024#

Unveiling a Common Phase Transition Pathway of High-Density Amorphous Ices through Time-Resolved X-ray Scattering
Yang, Cheolhee; Ladd-Parada, Marjorie; Nam, Kyeongmin; Jeong, Sangmin; You, Seonju; Eklund, Tobias; Spaeh, Alexander; Pathak, Harshad; Lee, Jae Hyuk; Eom, Intae; Kim, Minseok; Perakis, Fivos; Nilsson, Anders; Kim, Kyung Hwan and Amann-Winkel, Katrin
J. Chem. Phys, in press (2024)

2023#

Nanocrystallites Modulate Intermolecular Interactions in Cryoprotected Protein Solutions.
Filianina, Mariia; Bin, Maddalena; Berkowicz, Sharon; Reiser, Mario; Li, Hailong; Timmermann, Sonja; Blankenburg, Malte; Amann-Winkel, Katrin; Gutt, Christian; Perakis, Fivos
J. Phys. Chem. B, 127, 6197–6204 (2023)

Coherent X-ray Scattering Reveals Nanoscale Fluctuations in Hydrated Proteins.
Bin, Maddalena; Reiser, Mario; Filianina, Mariia; Berkowicz, Sharon; Das, Sudipta; Timmermann, Sonja; Roseker, Wojciech; Bauer, Robert; Öström, Jonatan; Karina, Aigerim; Amann-Winkel, Katrin; Ladd-Parada, Marjorie; Westermeier, Fabian; Sprung, Michael; Möller, Johannes; Lehmkühler, Felix; Gutt, Christian; Perakis, Fivos
J. Phys. Chem. B 127, 4922–4930 (2023)

Intrinsic Dynamics of Amorphous Ice Revealed by a Heterodyne Signal in X-Ray Photon Correlation Spectroscopy Experiments
Li, Hailong; Ladd-Parada, Marjorie; Karina, Aigerim; Dallari, Francesco; Reiser, Mario; Perakis, Fivos; Striker, Nele; Sprung, Michael; Westermeier, Fabian; Grübel, Gerhard; Steffen, Werner; Lehmkühler, Felix; Amann-Winkel, Katrin
J. Phys. Chem. Lett. 14, 10999–11007 (2023)

Melting Domain Size and Recrystallization Dynamics of Ice Revealed by Time-Resolved X-ray Scattering.
Yang, Cheolhee; Ladd-Parada, Marjorie; Nam, Kyeongmin; Jeong, Sangmin; You, Seonju; Späh, Alexander; Pathak, Harshad; Eklund, Tobias; Lane, Thomas J.; Lee, Jae Hyuk; Eom, Intae; Kim, Minseok; Winkel, Katrin Amann-; Perakis, Fivos; Nilsson, Anders; Kim, Kyung Hwan
Nature Commun. 14, 3313 (2023)

Liquid-liquid phase separation in supercooled water from ultrafast heating of low-density amorphous ice.
Amann-Winkel, Katrin; Kim, Kyung Hwan; Giovambattista, Nicolas; Ladd-Parada, Marjorie; Späh, Alexander; Perakis, Fivos; Pathak, Harshad; Yang, Cheolhee; Eklund, Tobias; Lane, Thomas J.; You, Seonju; Jeong, Sangmin; Lee, Jae Hyuk; Eom, Intae; Kim, Minseok; Park, Jaeku; Chun, Sae Hwan; Poole, Peter H.; Nilsson, Anders
Nature Commun., 14, 442 (2023)

2022#

Resolving molecular diffusion and aggregation of antibody proteins with megahertz X-ray free-electron laser pulses.
Reiser, Mario; Girelli, Anita; Ragulskaya, Anastasia; Das, Sudipta; Berkowicz, Sharon; Bin, Maddalena; Ladd-Parada, Marjorie; Filianina, Mariia; Poggemann, Hanna-Friederike; Begam, Nafisa; Akhundzadeh, Mohammad Sayed; Timmermann, Sonja; Randolph, Lisa; Chushkin, Yuriy; Seydel, Tilo; Boesenberg, Ulrike; Hallmann, Jörg; Möller, Johannes; Rodriguez-Fernandez, Angel; Rosca, Robert; Schaffer, Robert; Scholz, Markus; Shayduk, Roman; Zozulya, Alexey; Madsen, Anders; Schreiber, Frank; Zhang, Fajun; Perakis, Fivos; Gutt, Christian
Nature Commun., 13, 1-10 (2022)

Nanofocused x-ray photon correlation spectroscopy.
Berkowicz, Sharon; Das, Sudipta; Reiser, Mario; Filianina, Mariia; Bin, Maddalena; Crevatin, Giulio; Hennies, Franz; Weninger, Clemens; Björling, Alexander; Bell, Paul; Perakis, Fivos
Phys. Rev. Res., 4, L032012 (2022)

Following the Crystallization of Amorphous Ice after Ultrafast Laser Heating.
Ladd-Parada, Marjorie; Amann-Winkel, Katrin; Kim, Kyung Hwan; Späh, Alexander; Perakis, Fivos; Pathak, Harshad; Yang, Cheolhee; Mariedahl, Daniel; Eklund, Tobias; Lane, Thomas J.; You, Seonju; Jeong, Sangmin; Weston, Matthew; Lee, Jae Hyuk; Eom, Intae; Kim, Minseok; Park, Jaeku; Chun, Sae Hwan; Nilsson, Anders
J. Phys. Chem. B, 126, 2299-2307 (2022)

Using coherent X-rays to follow dynamics in amorphous ices.
Ladd-Parada, Marjorie; Li, Hailong; Karina, Aigerim; Kim, Kyung Hwan; Perakis, Fivos; Reiser, Mario; Dallari, Francesco; Striker, Nele; Sprung, Michael; Westermeier, Fabian; Grübel, Gerhard; Nilsson, Anders; Lehmkühler, Felix; Amann-Winkel, Katrin
Environ. Sci.: Atmos., 2, 1314-1323 (2022)

Symmetry-resolved CO desorption and oxidation dynamics on O/Ru(0001) probed at the C K-edge by ultrafast x-ray spectroscopy.
LaRue, Jerry; Liu, Boyang; Rodrigues, Gabriel L. S.; Liu, Chang; Garrido Torres, Jose Antonio; Schreck, Simon; Diesen, Elias; Weston, Matthew; Ogasawara, Hirohito; Perakis, Fivos; Dell’Angela, Martina; Capotondi, Flavio; Ball, Devon; Carnahan, Conner; Zeri, Gary; Giannessi, Luca; Pedersoli, Emanuele; Naumenko, Denys; Amann, Peter; Nikolov, Ivaylo; Raimondi, Lorenzo; Spezzani, Carlo; Beye, Martin; Voss, Johannes; Wang, Hsin-Yi; Cavalca, Filippo; Gladh, Jörgen; Koroidov, Sergey; Abild-Pedersen, Frank; Kolb, Manuel; Miedema, Piter S.; Costantini, Roberto; Heinz, Tony F.; Luntz, Alan C.; Pettersson, Lars G. M.; Nilsson, Anders
J. Chem. Phys., 157, 164705 (2022)

Atom-Specific Probing of Electron Dynamics in an Atomic Adsorbate by Time-Resolved X-Ray Spectroscopy.
Schreck, Simon; Diesen, Elias; Dell’Angela, Martina; Liu, Chang; Weston, Matthew; Capotondi, Flavio; Ogasawara, Hirohito; LaRue, Jerry; Costantini, Roberto; Beye, Martin; Miedema, Piter S.; Halldin Stenlid, Joakim; Gladh, Jörgen; Liu, Boyang; Wang, Hsin-Yi; Perakis, Fivos; Cavalca, Filippo; Koroidov, Sergey; Amann, Peter; Pedersoli, Emanuele; Naumenko, Denys; Nikolov, Ivaylo; Raimondi, Lorenzo; Abild-Pedersen, Frank; Heinz, Tony F.; Voss, Johannes; Luntz, Alan C.; Nilsson, Anders
Phys. Rev. Lett., 129, 276001 (2022)

2021#

Enhancement and maximum in the isobaric specific-heat capacity measurements of deeply supercooled water using ultrafast calorimetry.
Pathak, Harshad; Späh, Alexander; Esmaeildoost, Niloofar; Sellberg, Jonas A.; Kim, Kyung Hwan; Perakis, Fivos; Amann-Winkel, Katrin; Ladd-Parada, Marjorie; Koliyadu, Jayanath; Lane, Thomas J.; Yang, Cheolhee; Lemke, Henrik Till; Oggenfuss, Alexander Roland; Johnson, Philip J. M.; Deng, Yunpei; Zerdane, Serhane; Mankowsky, Roman; Beaud, Paul; Nilsson, Anders
Proc. Natl. Acad. Sci. U.S.A., 118, e2018379118 (2021)

Wide-angle X-ray scattering and molecular dynamics simulations of supercooled protein hydration water.
Bin, Maddalena; Yousif, Rafat; Berkowicz, Sharon; Das, Sudipta; Schlesinger, Daniel; Perakis, Fivos
Phys. Chem. Chem. Phys., 23, 18308-18313 (2021)

Exploring the validity of the Stokes–Einstein relation in supercooled water using nanomolecular probes.
Berkowicz, Sharon; Perakis, Fivos
Phys. Chem. Chem. Phys., 23, 25490-25499 (2021)

Long-Range Structures of Amorphous Solid Water.
Li, Hailong; Karina, Aigerim; Ladd-Parada, Marjorie; Späh, Alexander; Perakis, Fivos; Benmore, Chris; Amann-Winkel, Katrin
J. Phys. Chem. B, 125, 13320-13328 (2021)

Ultrafast Adsorbate Excitation Probed with Subpicosecond-Resolution X-Ray Absorption Spectroscopy.
Diesen, Elias; Wang, Hsin-Yi; Schreck, Simon; Weston, Matthew; Ogasawara, Hirohito; LaRue, Jerry; Perakis, Fivos; Dell’Angela, Martina; Capotondi, Flavio; Giannessi, Luca; Pedersoli, Emanuele; Naumenko, Denys; Nikolov, Ivaylo; Raimondi, Lorenzo; Spezzani, Carlo; Beye, Martin; Cavalca, Filippo; Liu, Boyang; Gladh, Jörgen; Koroidov, Sergey; Miedema, Piter S.; Costantini, Roberto; Heinz, Tony F.; Abild-Pedersen, Frank; Voss, Johannes; Luntz, Alan C.; Nilsson, Anders
Phys. Rev. Lett., 127, 016802 (2021)

Anomalous temperature dependence of the experimental x-ray structure factor of supercooled water.
Esmaeildoost, Niloofar; Pathak, Harshad; Späh, Alexander; Lane, Thomas J.; Kim, Kyung Hwan; Yang, Cheolhee; Amann-Winkel, Katrin; Ladd-Parada, Marjorie; Perakis, Fivos; Koliyadu, Jayanath; Oggenfuss, Alexander R.; Johnson, Philip J. M.; Deng, Yunpei; Zerdane, Serhane; Mankowsky, Roman; Beaud, Paul; Lemke, Henrik T.; Nilsson, Anders; Sellberg, Jonas A.
J. Chem. Phys., 155, 214501 (2021)

Analysis Strategies for MHz XPCS at the European XFEL.
Dallari, Francesco; Reiser, Mario; Lokteva, Irina; Jain, Avni; Möller, Johannes; Scholz, Markus; Madsen, Anders; Grübel, Gerhard; Perakis, Fivos; Lehmkühler, Felix
Appl. Sci., 11, 8037 (2021)

2020#

X-Ray Studies of Water.
Nilsson, Anders; Perakis, Fivos
Synchrotron Light Sources and Free-Electron Lasers: Accelerator Physics, Instrumentation and Science Applications (2020)

Experimental observation of the liquid-liquid transition in bulk supercooled water under pressure.
Kim, Kyung Hwan; Amann-Winkel, Katrin; Giovambattista, Nicolas; Späh, Alexander; Perakis, Fivos; Pathak, Harshad; Parada, Marjorie Ladd; Yang, Cheolhee; Mariedahl, Daniel; Eklund, Tobias; Lane, Thomas. J.; You, Seonju; Jeong, Sangmin; Weston, Matthew; Lee, Jae Hyuk; Eom, Intae; Kim, Minseok; Park, Jaeku; Chun, Sae Hwan; Poole, Peter H.; Nilsson, Anders
Science, 370, 978-982 (2020)

Towards molecular movies with X-ray photon correlation spectroscopy.
Perakis, Fivos; Gutt, Christian
Phys. Chem. Chem. Phys., 22, 19443-19453 (2020)

Anisotropic X-Ray Scattering of Transiently Oriented Water.
Kim, Kyung Hwan; Späh, Alexander; Pathak, Harshad; Yang, Cheolhee; Bonetti, Stefano; Amann-Winkel, Katrin; Mariedahl, Daniel; Schlesinger, Daniel; Sellberg, Jonas A.; Mendez, Derek; van der Schot, Gijs; Hwang, Harold Y.; Clark, Jesse; Shigeki, Owada; Tadashi, Togashi; Harada, Yoshihisa; Ogasawara, Hirohito; Katayama, Tetsuo; Nilsson, Anders; Perakis, Fivos
Phys. Rev. Lett., 125, 076002 (2020)

Brine rejection and hydrate formation upon freezing of NaCl aqueous solutions.
Tsironi, Ifigeneia; Schlesinger, Daniel; Späh, Alexander; Eriksson, Lars; Segad, Mo; Perakis, Fivos
Phys. Chem. Chem. Phys., 22, 7625-7632 (2020)

Time-resolved observation of transient precursor state of CO on Ru(0001) using carbon K-edge spectroscopy.
Wang, Hsin-Yi; Schreck, Simon; Weston, Matthew; Liu, Chang; Ogasawara, Hirohito; LaRue, Jerry; Perakis, Fivos; Dell’Angela, Martina; Capotondi, Flavio; Giannessi, Luca; Pedersoli, Emanuele; Naumenko, Denys; Nikolov, Ivaylo; Raimondi, Lorenzo; Spezzani, Carlo; Beye, Martin; Cavalca, Filippo; Liu, Boyang; Gladh, Jörgen; Koroidov, Sergey; Miedema, Piter S.; Costantini, Roberto; Pettersson, Lars G. M.; Nilsson, Anders
Phys. Chem. Chem. Phys., 22, 2677-2684 (2020)

2019#

Insikter i vattnets mysteriergenom röntgen-laserexperiment.
Nilsson, Anders; Perakis, Fivos
Fysikatkuelt, 2, 20-23 (2019)

Temperature dependent anomalous fluctuations in water: shift of ≈1 kbar between experiment and classical force field simulations.
Pathak, Harshad; Späh, Alexander; Amann-Winkel, Katrin; Perakis, Fivos; Kim, Kyung Kyung Hwan; Nilsson, Anders
Mol. Phys., 117, 3232-3240 (2019)

X-ray studies of the transformation from high- to low-density amorphous water.
Mariedahl, Daniel; Perakis, Fivos; Späh, Alexander; Pathak, Harshad; Kim, Kyung Hwan; Benmore, Chris; Nilsson, Anders; Amann-Winkel, Katrin
Philos. Trans. Royal Soc. A, 377, 20180164 (2019)

2018 - 2015#

Coherent X-rays reveal the influence of cage effects on ultrafast water dynamics.
Perakis, Fivos; Camisasca, Gaia; Lane, Thomas J.; Späh, Alexander; Wikfeldt, Kjartan Thor; Sellberg, Jonas A.; Lehmkühler, Felix; Pathak, Harshad; Kim, Kyung Hwan; Amann-Winkel, Katrin; Schreck, Simon; Song, Sanghoon; Sato, Takahiro; Sikorski, Marcin; Eilert, Andre; McQueen, Trevor; Ogasawara, Hirohito; Nordlund, Dennis; Roseker, Wojciech; Koralek, Jake; Nelson, Silke; Hart, Philip; Alonso-Mori, Roberto; Feng, Yiping; Zhu, Diling; Robert, Aymeric; Grübel, Gerhard; Pettersson, Lars G. M.; Nilsson, Anders
Nature Commun., 9, 1917 (2018)

X-ray Scattering and O–O Pair-Distribution Functions of Amorphous Ices.
Mariedahl, Daniel; Perakis, Fivos; Späh, Alexander; Pathak, Harshad; Kim, Kyung Hwan; Camisasca, Gaia; Schlesinger, Daniel; Benmore, Chris; Pettersson, Lars Gunnar Moody; Nilsson, Anders; Amann-Winkel, Katrin
J. Phys. Chem. B, 122, 7616-7624 (2018)

Apparent power-law behavior of water’s isothermal compressibility and correlation length upon supercooling.
Späh, Alexander; Pathak, Harshad; Kim, Kyung Hwan; Perakis, Fivos; Mariedahl, Daniel; Amann-Winkel, Katrin; Sellberg, Jonas A.; Lee, Jae Hyuk; Kim, Sangsoo; Park, Jaehyun; Nam, Ki Hyun; Katayama, Tetsuo; Nilsson, Anders
Phys. Chem. Chem. Phys., 21, 26-31 (2018)

Atom-specific activation in CO oxidation.
Schreck, Simon; Diesen, Elias; LaRue, Jerry; Ogasawara, Hirohito; Marks, Kess; Nordlund, Dennis; Weston, Matthew; Beye, Martin; Cavalca, Filippo; Perakis, Fivos; Sellberg, Jonas; Eilert, André; Kim, Kyung Hwan; Coslovich, Giacomo; Coffee, Ryan; Krzywinski, Jacek; Reid, Alex; Moeller, Stefan; Lutman, Alberto; Öström, Henrik; Pettersson, Lars G. M.; Nilsson, Anders
J. Chem. Phys., 149, 234707 (2018)

Response to Comment on “Maxima in the thermodynamic response and correlation functions of deeply supercooled water”.
Kim, Kyung Hwan; Späh, Alexander; Pathak, Harshad; Perakis, Fivos; Mariedahl, Daniel; Amann-Winkel, Katrin; Sellberg, Jonas A.; Lee, Jae Hyuk; Kim, Sangsoo; Park, Jaehyun; Nam, Ki Hyun; Katayama, Tetsuo; Nilsson, Anders
Science, 360, eaat1729 (2018)

Maxima in the thermodynamic response and correlation functions of deeply supercooled water.
Kim, Kyung Hwan; Späh, Alexander; Pathak, Harshad; Perakis, Fivos; Mariedahl, Daniel; Amann-Winkel, Katrin; Sellberg, Jonas A.; Lee, Jae Hyuk; Kim, Sangsoo; Park, Jaehyun; Nam, Ki Hyun; Katayama, Tetsuo; Nilsson, Anders
Science, 358, 1589-1593 (2017)

Diffusive dynamics during the high-to-low density transition in amorphous ice.
Perakis, Fivos; Amann-Winkel, Katrin; Lehmkühler, Felix; Sprung, Michael; Mariedahl, Daniel; Sellberg, Jonas A.; Pathak, Harshad; Späh, Alexander; Cavalca, Filippo; Schlesinger, Daniel; Ricci, Alessandro; Jain, Avni; Massani, Bernhard; Aubree, Flora; Benmore, Chris J.; Loerting, Thomas; Grübel, Gerhard; Pettersson, Lars G. M.; Nilsson, Anders
Proc. Natl. Acad. Sci. U.S.A., 114, 8193-8198 (2017)

Temperature-Independent Nuclear Quantum Effects on the Structure of Water.
Kim, Kyung Hwan; Pathak, Harshad; Späh, Alexander; Perakis, Fivos; Mariedahl, Daniel; Sellberg, Jonas A.; Katayama, Tetsuo; Harada, Yoshihisa; Ogasawara, Hirohito; Pettersson, Lars G. M.; Nilsson, Anders
Phys. Rev. Lett., 119, 075502 (2017)

Chemical Dynamics in Liquid Water and at Catalytic Surfaces.
Ogasawara, Hirohito; Perakis, Fivos; Nilsson, Anders
X-Ray Free Electron Lasers: Applications in Materials, Chemistry and Biology Energy and Environment Series X-Ray Free Electron Lasers: Applications in Materials, Chemistry and Biology (2017)

Probing water with X-ray lasers.
Nilsson, Anders; Schreck, Simon; Perakis, Fivos; Pettersson, Lars G. M.
Adv. Phys.: X, 1, 226-245 (2016)

Vibrational Spectroscopy and Dynamics of Water.
Perakis, Fivos; De Marco, Luigi; Shalit, Andrey; Tang, Fujie; Kann, Zachary R.; Kühne, Thomas D.; Torre, Renato; Bonn, Mischa; Nagata, Yuki
Chem. Rev., 116, 7590-7607 (2016)

2014 - 2011#

Small-world networks of optical fiber lattices.
Perakis, Fivos; Mattheakis, Marios; Tsironis, George P.
J. Opt., 16, 102003 (2014)

Communication: Disorder-suppressed vibrational relaxation in vapor-deposited high-density amorphous ice.
Shalit, Andrey; Perakis, Fivos; Hamm, Peter
J. Chem. Phys., 140, 151102 (2014)

Testing for memory-free spectroscopic coordinates by 3D IR exchange spectroscopy.
Borek, Joanna A.; Perakis, Fivos; Hamm, Peter
Proc. Natl. Acad. Sci. U.S.A., 111, 10462-10467 (2014)

Three-dimensional infrared spectroscopy of isotope-diluted ice Ih.
Perakis, Fivos; Borek, Joanna A.; Hamm, Peter
J. Chem. Phys., 139, 014501 (2013)

Two-Dimensional Infrared Spectroscopy of Isotope-Diluted Low Density Amorphous Ice.
Shalit, Andrey; Perakis, Fivos; Hamm, Peter
J. Phys. Chem. B, 117, 15512-15518 (2013)

Ultrafast Dynamics of Liquid Water and Ice.
Perakis, Fivos; Hamm, Peter
Chimia, 66, 244-244 (2012)

Two-dimensional infrared spectroscopy of neat ice Ih.
Perakis, Fivos; Hamm, Peter
Phys. Chem. Chem. Phys., 14, 6250-6256 (2012)

Erratum: “Azide–water intermolecular coupling measured by two-color two-dimensional infrared spectroscopy” [J. Chem. Phys. 136, 224503 (2012)].
Borek, Joanna; Perakis, Fivos; Kläsi, Felix; Garrett-Roe, Sean; Hamm, Peter
J. Chem. Phys., 137, 069902 (2012)

Azide–water intermolecular coupling measured by two-color two-dimensional infrared spectroscopy.
Borek, Joanna; Perakis, Fivos; Kläsi, Felix; Garrett-Roe, Sean; Hamm, Peter
J. Chem. Phys., 136, 224503 (2012)

Discrete nonlinear Schrödinger equation dynamics in complex networks.
Perakis, Fivos; Tsironis, George P.
Phys. lett. A, 375, 676-679 (2011)

Three-Dimensional Infrared Spectroscopy of Isotope-Substituted Liquid Water Reveals Heterogeneous Dynamics.
Garrett-Roe, Sean; Perakis, Fivos; Rao, Francesco; Hamm, Peter
J. Phys. Chem. B, 115, 6976-6984 (2011)

Two-dimensional infrared spectroscopy of isotope-diluted ice Ih.
Perakis, Fivos; Widmer, Susanne; Hamm, Peter
J. Chem. Phys., 134, 204505 (2011)

Two-Dimensional Infrared Spectroscopy of Supercooled Water.
Perakis, Fivos; Hamm, Peter
J. Phys. Chem. B, 115, 5289-5293 (2011)


Selected review articles#

Towards molecular movies with X-ray photon correlation spectroscopy.
Perakis, Fivos; Gutt, Christian
Phys. Chem. Chem. Phys., 22, 19443-19453 (2020)

X-Ray Studies of Water.
Nilsson, Anders; Perakis, Fivos
Synchrotron Light Sources and Free-Electron Lasers: Accelerator Physics, Instrumentation and Science Applications (2020)

Vibrational Spectroscopy and Dynamics of Water.
Perakis, Fivos; De Marco, Luigi; Shalit, Andrey; Tang, Fujie; Kann, Zachary R.; Kühne, Thomas D.; Torre, Renato; Bonn, Mischa; Nagata, Yuki
Chem. Rev., 116, 7590-7607 (2016)